Carnwenan is shown as not quite a rebel but more so an oddball of Caldari society; she has less of a regard for rules and regulations than the ideal fellow citizen who "always obeys" and believes that "questioning the system is bad." Carnwenan reveals that she finds Caldari and its perfect fellow citizen "boring."
Despite thinking deeply on these things, her feet still moved.
Looking down at the Caldari citizens, she stepped onto High sec incursions farm.
It is possible everyone felt that way, that the more perfect she became as a capsuleer, the more they needed to question her as a F1 monkey. The felt that a capsuleer without emotion cannot F1 over others. She simply accepted this to be a natural event that is part of the process of government, isolating the fair capsuleer honored by her monkeys. Having abandoned her emotions from the start, she did not change her mind even if she was abandoned, warp disrupted, or jammed.